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Haplogroup O (Y-DNA)

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In human genetics, Haplogroup O (M175) is a Y-chromosome DNA haplogroup. Haplogroup O is a close cladistic brother group with Haplogroup N, and is one of several descendants of Haplogroup K (the intermediates being Haplogroup NOP and Haplogroup NO).

Origins

Haplogroup O is a descendant haplogroup of Haplogroup NO (M214), and is believed to have first appeared in Southeast Asia approximately 35,000 years ago. Haplogroup O shares a node in the phylogenetic tree of human Y-chromosomes with Haplogroup N, which is common throughout North Eurasia.

Distribution

This haplogroup appears in 80-90% of all men in East and Southeast Asia, and it is almost exclusive to that region: M175 is almost nonexistent in Western Siberia, Western Asia, Europe, and Africa and is completely absent from the Americas, although certain subclades of Haplogroup O do achieve significant frequencies among some populations of South Asia, Central Asia, and Oceania.

Among the subbranches of Haplogroup O are Haplogroup O1, Haplogroup O2, and Haplogroup O3.

Haplogroup O* lineages, which belong to Haplogroup O but do not display any of the later mutations that define the major subclades O1, O2, and O3, can still be detected at a low frequency among most modern populations of Central Asia and East Asia. For example, a broad survey of Y-chromosome variation among populations of central Eurasia found haplogroup O-M175*(xO1a-M119,O2a-M95,O3-M122) in 2.5% (one out of 40 individuals) of a sample of Tajiks in Samarkand, 4.5% (1/22) of Crimean Tatars in Uzbekistan, 1.5% (1/68) of Uzbeks in Surkhandarya, 1.4% (1/70) of Uzbeks in Khorezm, 12.5% (2/16) of Tajiks in Dushanbe, 1.9% (1/54) of Kazakhs in Kazakhstan, 4.9% (2/41) of Uyghurs in Kazakhstan, and 31.1% (14/45) of Koreans. However, nearly all of these Korean O*(xO1a,O2a,O3) Y-chromosomes probably belong to Haplogroup O2b, which has been found in approximately 30% of many samples of Koreans. There is also a possibility that the so-called Haplogroup O* Y-chromosomes that have been found among these populations might belong to Haplogroup O1*(xO1a-M119), Haplogroup O2*(xO2a-M95,O2b-M176), or Haplogroup O2b-M176.

Haplogroup O1a-M119


Found frequently in Austronesians, southern Han Chinese, and Kradai peoples.

Haplogroup O2a-M95


Found among the Austro-Asiatic peoples, Kradai peoples, Malays, Indonesians, and Malagasy, with a moderate distribution throughout South Asia, Southeast Asia, East Asia, and Central Asia.

Haplogroup O2a1-M88

Frequently found among Hani, She people, Tai peoples, Cambodians, and Vietnamese, with a moderate distribution among Qiang, Yi, Hlai, Miao, Yao, Taiwanese aborigines, and Han Chinese.

Haplogroup O2a1a-PK4

Found at low frequency among Pashtuns,Firasat et al. (2007), , European Journal of Human Genetics 15, 121–126 Tharus,Simona Fornarino, Maria Pala, Vincenza Battaglia et al., "Mitochondrial and Y-chromosome diversity of the Tharus (Nepal): a reservoir of genetic variation," BMC Evolutionary Biology 2009, 9:154. and tribals of Andhra Pradesh.

Haplogroup O2b-M176


Found frequently among Koreans, with a moderate distribution among Buryats, Beijing Chinese, Daurs, Chinese Evenks, Hezhe, Indonesians, Japanese, Manchus, Micronesians, Ryukyuans, Sibe, Thais, and Vietnamese.

Haplogroup O2b1-47z

Found frequently among Japanese and Ryukyuans, with a moderate distribution among Indonesians, Koreans, Manchus, Thais, and Vietnamese.

Haplogroup O3-M122


Found frequently among populations of East Asia, Southeast Asia, and culturally Austronesian regions of Oceania, with a moderate distribution in Central Asia.

Haplogroup O3a3c-M134

Found frequently among Sino-Tibetan peoples, with a moderate distribution throughout East Asia and Southeast Asia.

Haplogroup O3a3b-M7

Found frequently among Hmong-Mien peoples, with a moderate distribution among Han Chinese,Xue et al. (2006), "Male Demography in East Asia: A North–South Contrast in Human Population Expansion Times," Genetics 172(4): 2431–2439. Buyei, Bai,WEN Bo, SHI Hong, REN Ling et al., "The origin of Mosuo people as revealed by mtDNA and Y chromosome variation," Science in China Ser. C Life Sciences 2004 Vol.47 No.1 1—10. Mosuo, Tibetans, Qiang, Oroqen, Tujia,Bing Su, Li Jin, Peter Underhill et al., "Polynesian origins: Insights from the Y chromosome," PNAS, vol. 97, no. 15, 8225–8228 (July 18, 2000). Thai, Orang Asli, western Indonesians,Manfred Kayser, Ying Choi, Mannis van Oven et al., "The impact of the Austronesian expansion: evidence from mtDNA and Y-chromosome diversity in the Admiralty Islands of Melanesia," Molecular Biology and Evolution 2008 25(7):1362-1374; doi:10.1093/molbev/msn078 Malaysians, Vietnamese, and Atayal.''

Subclades

Tree

This phylogenetic tree of haplogroup subclades is based on the YCC 2008 treeKarafet et al. (2008), , Genome Research, DOI: 10.1101/gr.7172008 and subsequent published research.
  • O
  • *O-M175 (M175, P186, P191, P196)
  • **O1-MSY2.2 (MSY2.2)
  • ***O1a-M119 (M119)
  • ****O-P203 (P203)
  • *****O-M101 (M101)
  • ****O-M50 (M50, M103, M110)
  • **O2-P31 (P31)
  • ***O2a-M95 (M95)
  • ****O-M88 (M88, M111)
  • *****O-PK4 (PK4)
  • ***O2b-SRY465 (SRY465, P49, 022454)
  • ****O-47z (47z)
  • **O3-M122 (M122)
  • ***O3a-M324 (M324, P93, P197, P198, P199, P200)
  • ****O-M121 (M121, P27.2)
  • ****O-M164 (M164)
  • ****O-P201 (P201/021354)
  • *****O-M159 (M159)
  • *****O-M7 (M7)
  • ******O-M113 (M113, M188, M209)
  • *******O-N4 (N4)
  • *******O-N5 (N5)
  • ******O-P164 (P164)
  • *****O-M134 (M134)
  • ******O-M117 (M117, M133)
  • *******O-M162 (M162)
  • ******O-P101 (P101)
  • ****O-002611 (002611)
  • ****O-M300 (M300)
  • ****O-M333 (M333)

 
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